I wouldn't even attempt to clean it.. just install a new build of Ubuntu, replacing the old.
I scrapped Ubuntu and went with Linux Mint 16 Petra 64 bit instead. I could no longer stand Ubuntu's stupid desktop environment. If you're installing 64 bit, make sure you have at least 4 gb of ram. gnuradio won't compile with less.
Also, prior to installing Pybombs, you need to manually install an audio dependency. See this post I made over on the RadioReference forums.
-Scott
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